Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus F46600
NCBI Strain Identifiers F46600
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 19
Contig Count 31
N50 Contigs 202,213 bp
Longest Contig 758,887 bp
Scaffold Count 31
N50 Scaffolds 202,213 bp
Longest Scaffold 758,887 bp
Genome Size 2,915,270 bp
Protein Count 2,748
Coding Density 83.88%
GC Percentage 32.74%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Stap_aure_F46600_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02383696
Country USA: Irvine; CA
Date 2014-2-5
Genbank Assembly Accession GCA_000593585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 3,036
Refseq Category na
Seq Rel Date 2014/02/05
Spanned Gaps 0
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1410776
Total Gap Length 0
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDGI00000000.1