Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus F64894
NCBI Strain Identifiers F64894
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.8%
CheckM Strain Heterogeneity 33.33
5S Count 0
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 60
N50 Contigs 111,920 bp
Longest Contig 284,376 bp
Scaffold Count 56
N50 Scaffolds 122,543 bp
Longest Scaffold 284,376 bp
Genome Size 2,916,368 bp
Protein Count 2,771
Coding Density 83.97%
GC Percentage 32.74%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_F64894_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403131
Country USA: Irvine; CA
Date 2014-3-11
Genbank Assembly Accession GCA_000587655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,019
Refseq Category na
Seq Rel Date 2014/03/11
Spanned Gaps 4
Species Taxid 1280
SSU Count 1
Submitter Broad Institute
Taxid 1421841
Total Gap Length 741
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JFUJ00000000.1