Staphylococcus aureus
Isolate HQ 16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus W19256
NCBI Strain Identifiers W19256
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 1
tRNA Count 17
Contig Count 38
N50 Contigs 137,188 bp
Longest Contig 314,320 bp
Scaffold Count 36
N50 Scaffolds 164,489 bp
Longest Scaffold 314,320 bp
Genome Size 2,838,563 bp
Protein Count 2,659
Coding Density 84.15%
GC Percentage 32.73%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_W19256_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02403194
Country USA: Irvine; CA
Date 2014-3-11
Genbank Assembly Accession GCA_000586875.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,924
Refseq Category na
Seq Rel Date 2014/03/11
Spanned Gaps 2
Species Taxid 1280
SSU Count 3
Submitter Broad Institute
Taxid 1421904
Total Gap Length 460
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JFSW00000000.1