Legionella pneumophila
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila; sb__Legionella pneumophila subsp. pneumophila
NCBI Strain Identifiers ATCC 35096
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008485.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 74
N50 Contigs 94,637 bp
Longest Contig 275,725 bp
Scaffold Count 61
N50 Scaffolds 107,628 bp
Longest Scaffold 347,117 bp
Genome Size 3,437,975 bp
Protein Count 3,042
Coding Density 88.29%
GC Percentage 38.33%
Ambiguous Bases 1
GTDB representative GCA_000008485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ATCC_35096
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02650972
Country Canada
Date 2014-03-07
Genbank Assembly Accession GCA_000586215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source lung
Latitude Longitude None
Molecule Count N/A
CDS Count 3,082
Refseq Category na
Seq Rel Date 2014/03/07
Spanned Gaps 14
Species Taxid 446
SSU Count 1
Submitter Beijing Institute of Microbiology and Epidemiology
Taxid 91891
Total Gap Length 2099
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JFIH00000000.1