Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus F16106
NCBI Strain Identifiers F16106
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 3
tRNA Count 20
Contig Count 52
N50 Contigs 95,753 bp
Longest Contig 249,537 bp
Scaffold Count 42
N50 Scaffolds 156,852 bp
Longest Scaffold 343,422 bp
Genome Size 2,830,549 bp
Protein Count 2,631
Coding Density 83.32%
GC Percentage 32.75%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_F16106_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02398824
Country USA: Irvine; CA
Date 2014-2-25
Genbank Assembly Accession GCA_000579195.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,881
Refseq Category na
Seq Rel Date 2014/02/25
Spanned Gaps 10
Species Taxid 1280
SSU Count 2
Submitter Broad Institute
Taxid 1417132
Total Gap Length 1373
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JESD00000000.1