Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus F82568
NCBI Strain Identifiers F82568
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 5
tRNA Count 20
Contig Count 14
N50 Contigs 467,571 bp
Longest Contig 749,054 bp
Scaffold Count 13
N50 Scaffolds 467,571 bp
Longest Scaffold 848,584 bp
Genome Size 2,868,313 bp
Protein Count 2,652
Coding Density 83.44%
GC Percentage 32.73%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_F82568_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02398807
Country USA: Irvine; CA
Date 2014-2-25
Genbank Assembly Accession GCA_000578995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,940
Refseq Category na
Seq Rel Date 2014/02/25
Spanned Gaps 1
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1417115
Total Gap Length 100
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JERT00000000.1