Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus T77565
NCBI Strain Identifiers T77565
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 46
N50 Contigs 153,309 bp
Longest Contig 296,865 bp
Scaffold Count 42
N50 Scaffolds 160,253 bp
Longest Scaffold 296,865 bp
Genome Size 2,780,631 bp
Protein Count 2,585
Coding Density 83.71%
GC Percentage 32.76%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_T77565_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02398757
Country USA: Irvine; CA
Date 2014-2-25
Genbank Assembly Accession GCA_000578295.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,831
Refseq Category na
Seq Rel Date 2014/02/25
Spanned Gaps 4
Species Taxid 1280
SSU Count 2
Submitter Broad Institute
Taxid 1417065
Total Gap Length 886
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JEQK00000000.1