Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M1195
NCBI Strain Identifiers M1195
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 10
tRNA Count 20
Contig Count 52
N50 Contigs 160,015 bp
Longest Contig 570,507 bp
Scaffold Count 51
N50 Scaffolds 175,643 bp
Longest Scaffold 570,507 bp
Genome Size 2,887,011 bp
Protein Count 2,714
Coding Density 84.13%
GC Percentage 32.87%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M1195_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02360859
Country USA: Boston; MA; USA
Date 2014-2-19
Genbank Assembly Accession GCA_000575025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source pus
Latitude Longitude None
Molecule Count N/A
CDS Count 2,968
Refseq Category na
Seq Rel Date 2014/02/19
Spanned Gaps 1
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1402702
Total Gap Length 100
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JEJS00000000.1