Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus WMCA6086
NCBI Strain Identifiers WMCA6086
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 8
N50 Contigs 2,214,215 bp
Longest Contig 2,214,215 bp
Scaffold Count 3
N50 Scaffolds 2,312,227 bp
Longest Scaffold 2,312,227 bp
Genome Size 2,912,600 bp
Protein Count 2,697
Coding Density 83.02%
GC Percentage 32.76%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_WMCA6086_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02381742
Country USA: Irvine; CA
Date 2014-2-19
Genbank Assembly Accession GCA_000572465.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Wound
Latitude Longitude None
Molecule Count N/A
CDS Count 2,995
Refseq Category na
Seq Rel Date 2014/02/19
Spanned Gaps 5
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1409681
Total Gap Length 640
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDXC00000000.1