Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus F13022
NCBI Strain Identifiers F13022
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 3
tRNA Count 20
Contig Count 62
N50 Contigs 139,534 bp
Longest Contig 208,384 bp
Scaffold Count 57
N50 Scaffolds 142,688 bp
Longest Scaffold 230,255 bp
Genome Size 2,843,472 bp
Protein Count 2,674
Coding Density 83.96%
GC Percentage 32.80%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_F13022_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02385361
Country USA: Irvine; CA
Date 2014-2-14
Genbank Assembly Accession GCA_000571895.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 2,927
Refseq Category na
Seq Rel Date 2014/02/14
Spanned Gaps 5
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1412621
Total Gap Length 777
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JEFA00000000.1