Staphylococcus aureus
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus W64958
NCBI Strain Identifiers W64958
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 18
Contig Count 23
N50 Contigs 302,952 bp
Longest Contig 558,128 bp
Scaffold Count 21
N50 Scaffolds 305,788 bp
Longest Scaffold 832,481 bp
Genome Size 2,943,644 bp
Protein Count 2,765
Coding Density 83.41%
GC Percentage 32.75%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_W64958_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02385445
Country USA: Irvine; CA
Date 2014-2-14
Genbank Assembly Accession GCA_000570515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 3,056
Refseq Category na
Seq Rel Date 2014/02/14
Spanned Gaps 2
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1412705
Total Gap Length 302
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JECJ00000000.1