Lysinibacillus sphaericus_A
Isolate LQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Planococcaceae; g__Lysinibacillus; s__Lysinibacillus sphaericus_A
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Lysinibacillus; s__Lysinibacillus sphaericus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Lysinibacillus; s__Lysinibacillus sphaericus; x__Lysinibacillus sphaericus CBAM5
NCBI Strain Identifiers CBAM5
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001629735.1)
Genome Characteristics
CheckM Completeness 98.25%
CheckM Contamination 15.63%
CheckM Strain Heterogeneity 100.0
5S Count 18
16S Count 4
23S Count 6
tRNA Count 20
Contig Count 93
N50 Contigs 673,284 bp
Longest Contig 1,336,581 bp
Scaffold Count 58
N50 Scaffolds 4,612,092 bp
Longest Scaffold 4,612,092 bp
Genome Size 5,156,458 bp
Protein Count 4,978
Coding Density 83.20%
GC Percentage 37.19%
Ambiguous Bases N/A
GTDB representative GCA_001629735.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name LsCBAM5
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02356577
Country Colombia: Cundinamarca
Date 2014-2-28
Genbank Assembly Accession GCA_000568835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil in forest
Latitude Longitude None
Molecule Count 1
CDS Count 4,961
Refseq Category na
Seq Rel Date 2014/02/28
Spanned Gaps 35
Species Taxid 1421
SSU Count 5
Submitter Universidad de los Andes
Taxid 1400869
Total Gap Length 3500
Translation Table 11
tRNA Count (total) 198
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AYKQ00000000.1