Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus USA300-ISMMS1
NCBI Strain Identifiers USA300-ISMMS1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 3
N50 Contigs 2,921,008 bp
Longest Contig 2,921,008 bp
Scaffold Count 3
N50 Scaffolds 2,921,008 bp
Longest Scaffold 2,921,008 bp
Genome Size 2,951,201 bp
Protein Count 2,754
Coding Density 83.27%
GC Percentage 32.78%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM56845v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03081531
Country None
Date 2014-2-12
Genbank Assembly Accession GCA_000568455.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
CDS Count 3,040
Refseq Category na
Seq Rel Date 2014/02/12
Spanned Gaps 0
Species Taxid 1280
SSU Count 6
Submitter Mount Sinai School of Medicine
Taxid 1458279
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None