Cellulophaga lytica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Cellulophaga; s__Cellulophaga lytica
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Cellulophaga; s__Cellulophaga geojensis
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Cellulophaga; s__Cellulophaga geojensis; x__Cellulophaga geojensis KL-A
NCBI Strain Identifiers KL-A
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000190595.1)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 109
N50 Contigs 140,276 bp
Longest Contig 506,590 bp
Scaffold Count 109
N50 Scaffolds 140,276 bp
Longest Scaffold 506,590 bp
Genome Size 3,888,117 bp
Protein Count 3,505
Coding Density 91.39%
GC Percentage 31.94%
Ambiguous Bases N/A
GTDB representative GCA_000190595.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name KLA
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02952948
Country China: Dongshan;Fujian Province
Date 2014-2-11
Genbank Assembly Accession GCA_000568425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source rotting seaweed in seawater
Latitude Longitude None
Molecule Count N/A
CDS Count 3,466
Refseq Category na
Seq Rel Date 2014/02/11
Spanned Gaps 0
Species Taxid 935699
SSU Count 1
Submitter State Oceanic Administration
Taxid 1328323
Total Gap Length 0
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ARZX00000000.1