Klebsiella pneumoniae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Klebsiella; s__Klebsiella pneumoniae; x__Klebsiella pneumoniae BIDMC 45
NCBI Strain Identifiers BIDMC 45
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000742135.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 9
23S Count 9
tRNA Count 20
Contig Count 25
N50 Contigs 879,471 bp
Longest Contig 1,309,806 bp
Scaffold Count 11
N50 Scaffolds 1,688,949 bp
Longest Scaffold 1,758,277 bp
Genome Size 5,725,037 bp
Protein Count 5,386
Coding Density 87.09%
GC Percentage 57.07%
Ambiguous Bases N/A
GTDB representative GCA_000742135.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Kleb_pneu_BIDMC_45_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02356594
Country USA: Boston; MA
Date 2014-2-7
Genbank Assembly Accession GCA_000567025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source URINE
Latitude Longitude None
Molecule Count N/A
CDS Count 5,683
Refseq Category na
Seq Rel Date 2014/02/07
Spanned Gaps 14
Species Taxid 573
SSU Count 6
Submitter Broad Institute
Taxid 1400162
Total Gap Length 26314
Translation Table 11
tRNA Count (total) 90
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JCMM00000000.1