Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus H79477
NCBI Strain Identifiers H79477
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 40.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 77
N50 Contigs 75,440 bp
Longest Contig 273,208 bp
Scaffold Count 71
N50 Scaffolds 85,929 bp
Longest Scaffold 273,208 bp
Genome Size 2,853,668 bp
Protein Count 2,667
Coding Density 83.42%
GC Percentage 32.72%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_H79477_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02383803
Country None
Date 2014-2-6
Genbank Assembly Accession GCA_000565095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 2,951
Refseq Category na
Seq Rel Date 2014/02/06
Spanned Gaps 6
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1410883
Total Gap Length 610
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDNL00000000.1