Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus W85440
NCBI Strain Identifiers W85440
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 3
N50 Contigs 2,248,495 bp
Longest Contig 2,248,495 bp
Scaffold Count 2
N50 Scaffolds 2,866,824 bp
Longest Scaffold 2,866,824 bp
Genome Size 2,872,906 bp
Protein Count 2,655
Coding Density 83.28%
GC Percentage 32.76%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_W85440_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02384147
Country USA: Irvine; CA
Date 2014-2-6
Genbank Assembly Accession GCA_000564755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,944
Refseq Category na
Seq Rel Date 2014/02/06
Spanned Gaps 1
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1411601
Total Gap Length 107
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDRO00000000.1