Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus W68479
NCBI Strain Identifiers W68479
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 69
N50 Contigs 95,656 bp
Longest Contig 220,163 bp
Scaffold Count 66
N50 Scaffolds 95,847 bp
Longest Scaffold 234,482 bp
Genome Size 2,847,352 bp
Protein Count 2,668
Coding Density 84.02%
GC Percentage 32.84%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_W68479_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02384145
Country USA: Irvine; CA
Date 2014-2-6
Genbank Assembly Accession GCA_000564715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,925
Refseq Category na
Seq Rel Date 2014/02/06
Spanned Gaps 3
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1411599
Total Gap Length 375
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDRM00000000.1