Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus F22893
NCBI Strain Identifiers F22893
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.92%
CheckM Strain Heterogeneity 80.0
5S Count 0
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 31
N50 Contigs 206,439 bp
Longest Contig 375,195 bp
Scaffold Count 29
N50 Scaffolds 334,175 bp
Longest Scaffold 455,888 bp
Genome Size 2,825,937 bp
Protein Count 2,603
Coding Density 83.57%
GC Percentage 32.78%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_F22893_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02384057
Country USA: Irvine; CA
Date 2014-2-6
Genbank Assembly Accession GCA_000563015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,881
Refseq Category na
Seq Rel Date 2014/02/06
Spanned Gaps 2
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1411511
Total Gap Length 200
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDOG00000000.1