Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus W79328
NCBI Strain Identifiers W79328
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 2
tRNA Count 20
Contig Count 56
N50 Contigs 112,833 bp
Longest Contig 349,497 bp
Scaffold Count 50
N50 Scaffolds 138,684 bp
Longest Scaffold 349,497 bp
Genome Size 2,834,867 bp
Protein Count 2,674
Coding Density 84.00%
GC Percentage 32.80%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_W79328_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02383786
Country USA: Irvine; CA
Date 2014-2-6
Genbank Assembly Accession GCA_000562345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 2,931
Refseq Category na
Seq Rel Date 2014/02/06
Spanned Gaps 6
Species Taxid 1280
SSU Count 4
Submitter Broad Institute
Taxid 1410866
Total Gap Length 758
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDMY00000000.1