Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M70590
NCBI Strain Identifiers M70590
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 98.95%
CheckM Contamination 1.93%
CheckM Strain Heterogeneity 80.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 33
N50 Contigs 348,282 bp
Longest Contig 888,900 bp
Scaffold Count 31
N50 Scaffolds 348,282 bp
Longest Scaffold 964,528 bp
Genome Size 2,930,298 bp
Protein Count 2,748
Coding Density 83.58%
GC Percentage 32.78%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M70590_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02383676
Country USA: Irvine; CA
Date 2014-2-6
Genbank Assembly Accession GCA_000560385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 3,031
Refseq Category na
Seq Rel Date 2014/02/06
Spanned Gaps 2
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1410756
Total Gap Length 200
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDJE00000000.1