Staphylococcus aureus
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus W18443
NCBI Strain Identifiers W18443
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.23%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 3
tRNA Count 18
Contig Count 61
N50 Contigs 104,581 bp
Longest Contig 291,827 bp
Scaffold Count 59
N50 Scaffolds 117,342 bp
Longest Scaffold 291,827 bp
Genome Size 2,862,201 bp
Protein Count 2,696
Coding Density 84.01%
GC Percentage 32.84%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_W18443_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02383673
Country USA: Irvine; CA
Date 2014-2-6
Genbank Assembly Accession GCA_000560325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Nares
Latitude Longitude None
Molecule Count N/A
CDS Count 2,957
Refseq Category na
Seq Rel Date 2014/02/06
Spanned Gaps 2
Species Taxid 1280
SSU Count 4
Submitter Broad Institute
Taxid 1410753
Total Gap Length 200
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDJB00000000.1