Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M0384
NCBI Strain Identifiers M0384
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 6
tRNA Count 19
Contig Count 65
N50 Contigs 221,649 bp
Longest Contig 410,779 bp
Scaffold Count 62
N50 Scaffolds 221,649 bp
Longest Scaffold 564,454 bp
Genome Size 2,903,713 bp
Protein Count 2,760
Coding Density 84.29%
GC Percentage 32.83%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M0384_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02325379
Country USA: Boston; MA
Date 2014-2-5
Genbank Assembly Accession GCA_000555425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nares
Latitude Longitude None
Molecule Count N/A
CDS Count 3,017
Refseq Category na
Seq Rel Date 2014/02/05
Spanned Gaps 3
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1388255
Total Gap Length 365
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JCEN00000000.1