Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M0303
NCBI Strain Identifiers M0303
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.3%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 87.5
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 43
N50 Contigs 194,088 bp
Longest Contig 546,773 bp
Scaffold Count 41
N50 Scaffolds 194,088 bp
Longest Scaffold 546,773 bp
Genome Size 2,860,051 bp
Protein Count 2,673
Coding Density 83.57%
GC Percentage 32.87%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M0303_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02325324
Country USA: Boston; MA
Date 2014-2-5
Genbank Assembly Accession GCA_000554465.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source tip
Latitude Longitude None
Molecule Count N/A
CDS Count 2,931
Refseq Category na
Seq Rel Date 2014/02/05
Spanned Gaps 2
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1388200
Total Gap Length 336
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JCCR00000000.1