Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M0136
NCBI Strain Identifiers M0136
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 5
tRNA Count 19
Contig Count 44
N50 Contigs 159,451 bp
Longest Contig 546,709 bp
Scaffold Count 40
N50 Scaffolds 210,584 bp
Longest Scaffold 570,765 bp
Genome Size 2,853,653 bp
Protein Count 2,682
Coding Density 84.00%
GC Percentage 32.80%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M0136_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02325209
Country USA: Boston; MA
Date 2014-2-5
Genbank Assembly Accession GCA_000552605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum
Latitude Longitude None
Molecule Count N/A
CDS Count 2,936
Refseq Category na
Seq Rel Date 2014/02/05
Spanned Gaps 4
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1388085
Total Gap Length 400
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JBYP00000000.1