Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M1487
NCBI Strain Identifiers M1487
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.81%
CheckM Strain Heterogeneity 87.5
5S Count 0
16S Count 3
23S Count 6
tRNA Count 20
Contig Count 75
N50 Contigs 154,766 bp
Longest Contig 417,169 bp
Scaffold Count 72
N50 Scaffolds 154,766 bp
Longest Scaffold 417,169 bp
Genome Size 2,911,563 bp
Protein Count 2,766
Coding Density 84.00%
GC Percentage 32.88%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M1487_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02364010
Country USA: Boston; MA
Date 2014-2-4
Genbank Assembly Accession GCA_000549925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nares
Latitude Longitude None
Molecule Count N/A
CDS Count 3,034
Refseq Category na
Seq Rel Date 2014/02/04
Spanned Gaps 3
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1403871
Total Gap Length 1543
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JDAS00000000.1