Staphylococcus aureus
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M1380
NCBI Strain Identifiers M1380
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 5
tRNA Count 19
Contig Count 35
N50 Contigs 245,041 bp
Longest Contig 443,655 bp
Scaffold Count 34
N50 Scaffolds 245,041 bp
Longest Scaffold 443,655 bp
Genome Size 2,853,155 bp
Protein Count 2,675
Coding Density 84.18%
GC Percentage 32.79%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M1380_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02350560
Country USA: Boston; MA
Date 2014-2-4
Genbank Assembly Accession GCA_000548065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,936
Refseq Category na
Seq Rel Date 2014/02/04
Spanned Gaps 1
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1398005
Total Gap Length 385
Translation Table 11
tRNA Count (total) 56
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JCXD00000000.1