Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M0872
NCBI Strain Identifiers M0872
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.66%
CheckM Strain Heterogeneity 40.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 41
N50 Contigs 244,159 bp
Longest Contig 433,649 bp
Scaffold Count 40
N50 Scaffolds 245,291 bp
Longest Scaffold 433,649 bp
Genome Size 2,945,143 bp
Protein Count 2,762
Coding Density 83.64%
GC Percentage 32.88%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M0872_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02325772
Country USA: Boston; MA
Date 2014-2-4
Genbank Assembly Accession GCA_000544725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source nares
Latitude Longitude None
Molecule Count N/A
CDS Count 3,020
Refseq Category na
Seq Rel Date 2014/02/04
Spanned Gaps 1
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1388648
Total Gap Length 156
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JCQS00000000.1