Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus WMCA6092
NCBI Strain Identifiers WMCA6092
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.64%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 4
23S Count 5
tRNA Count 20
Contig Count 11
N50 Contigs 661,639 bp
Longest Contig 1,330,633 bp
Scaffold Count 9
N50 Scaffolds 1,561,816 bp
Longest Scaffold 1,561,816 bp
Genome Size 2,899,798 bp
Protein Count 2,690
Coding Density 83.31%
GC Percentage 32.72%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_WMCA6092_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02381760
Country USA: Irvine; CA
Date 2014-2-4
Genbank Assembly Accession GCA_000542595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sputum
Latitude Longitude None
Molecule Count N/A
CDS Count 2,979
Refseq Category na
Seq Rel Date 2014/02/04
Spanned Gaps 2
Species Taxid 1280
SSU Count 4
Submitter Broad Institute
Taxid 1409699
Total Gap Length 570
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JBGK00000000.1