Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus WMCS6038
NCBI Strain Identifiers WMCS6038
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 31
N50 Contigs 188,583 bp
Longest Contig 577,441 bp
Scaffold Count 27
N50 Scaffolds 400,196 bp
Longest Scaffold 1,083,743 bp
Genome Size 2,858,384 bp
Protein Count 2,657
Coding Density 83.38%
GC Percentage 32.83%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_WMCS6038_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02381492
Country USA: Irvine; CA
Date 2014-2-4
Genbank Assembly Accession GCA_000538855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,925
Refseq Category na
Seq Rel Date 2014/02/04
Spanned Gaps 4
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1409431
Total Gap Length 610
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JBLT00000000.1