Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus MISS6019
NCBI Strain Identifiers MISS6019
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 10
N50 Contigs 865,239 bp
Longest Contig 1,116,882 bp
Scaffold Count 8
N50 Scaffolds 867,453 bp
Longest Scaffold 1,271,289 bp
Genome Size 2,894,905 bp
Protein Count 2,680
Coding Density 83.44%
GC Percentage 32.86%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_MISS6019_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02381450
Country USA: Irvine; CA
Date 2014-2-4
Genbank Assembly Accession GCA_000538315.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Sputum
Latitude Longitude None
Molecule Count N/A
CDS Count 2,949
Refseq Category na
Seq Rel Date 2014/02/04
Spanned Gaps 2
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1409389
Total Gap Length 385
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JBNG00000000.1