Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M1042
NCBI Strain Identifiers M1042
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 77.78
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 34
N50 Contigs 359,543 bp
Longest Contig 451,737 bp
Scaffold Count 25
N50 Scaffolds 446,620 bp
Longest Scaffold 687,626 bp
Genome Size 2,913,725 bp
Protein Count 2,696
Coding Density 83.13%
GC Percentage 32.82%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M1042_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02360764
Country None
Date 2014-2-3
Genbank Assembly Accession GCA_000532315.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,963
Refseq Category na
Seq Rel Date 2014/02/03
Spanned Gaps 9
Species Taxid 1280
SSU Count 6
Submitter Broad Institute
Taxid 1402607
Total Gap Length 23979
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JAXX00000000.1