Staphylococcus aureus
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M0195
NCBI Strain Identifiers M0195
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.26%
CheckM Strain Heterogeneity 87.5
5S Count 0
16S Count 5
23S Count 5
tRNA Count 18
Contig Count 48
N50 Contigs 196,838 bp
Longest Contig 470,719 bp
Scaffold Count 22
N50 Scaffolds 494,017 bp
Longest Scaffold 846,211 bp
Genome Size 2,907,812 bp
Protein Count 2,678
Coding Density 82.36%
GC Percentage 32.85%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M0195_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02325673
Country USA: Boston; MA
Date 2014-2-3
Genbank Assembly Accession GCA_000531215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source hip joint fluid
Latitude Longitude None
Molecule Count N/A
CDS Count 2,967
Refseq Category na
Seq Rel Date 2014/02/03
Spanned Gaps 26
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1388549
Total Gap Length 23442
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JAZG00000000.1