Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M0176
NCBI Strain Identifiers M0176
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 28
N50 Contigs 286,416 bp
Longest Contig 532,785 bp
Scaffold Count 14
N50 Scaffolds 428,274 bp
Longest Scaffold 802,833 bp
Genome Size 2,915,608 bp
Protein Count 2,706
Coding Density 83.26%
GC Percentage 32.93%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M0176_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02325671
Country USA: Boston; MA
Date 2014-2-3
Genbank Assembly Accession GCA_000531115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source bronchial alveolar lavage
Latitude Longitude None
Molecule Count N/A
CDS Count 2,979
Refseq Category na
Seq Rel Date 2014/02/03
Spanned Gaps 14
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1388547
Total Gap Length 13643
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JAZI00000000.1