Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus M0121
NCBI Strain Identifiers M0121
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 11
tRNA Count 20
Contig Count 29
N50 Contigs 451,233 bp
Longest Contig 625,475 bp
Scaffold Count 22
N50 Scaffolds 570,521 bp
Longest Scaffold 865,123 bp
Genome Size 2,870,581 bp
Protein Count 2,679
Coding Density 83.90%
GC Percentage 32.86%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_M0121_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02325666
Country USA: Boston; MA
Date 2014-2-3
Genbank Assembly Accession GCA_000530965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source wound
Latitude Longitude None
Molecule Count N/A
CDS Count 2,950
Refseq Category na
Seq Rel Date 2014/02/03
Spanned Gaps 7
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1388542
Total Gap Length 2858
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JAZN00000000.1