Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; sb__Staphylococcus aureus subsp. aureus; x__Staphylococcus aureus subsp. aureus S0460
NCBI Strain Identifiers S0460
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 1.38%
CheckM Strain Heterogeneity 50.0
5S Count 0
16S Count 0
23S Count 0
tRNA Count 19
Contig Count 167
N50 Contigs 30,566 bp
Longest Contig 108,270 bp
Scaffold Count 167
N50 Scaffolds 30,566 bp
Longest Scaffold 108,270 bp
Genome Size 2,833,454 bp
Protein Count 2,780
Coding Density 84.40%
GC Percentage 32.79%
Ambiguous Bases 1
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name S0460D1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3138877
Country None
Date 2014-1-8
Genbank Assembly Accession GCA_000530215.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,963
Refseq Category na
Seq Rel Date 2014/01/08
Spanned Gaps 0
Species Taxid 1280
SSU Count 0
Submitter UMCU
Taxid 1288968
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CAVH000000000.1