Commensalibacter sp000527695
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Acetobacterales; f__Acetobacteraceae; g__Commensalibacter; s__Commensalibacter sp000527695
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Commensalibacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodospirillales; f__Acetobacteraceae; g__Commensalibacter; s__Commensalibacter sp. MX01
NCBI Strain Identifiers MX01
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.5%
CheckM Contamination 0.75%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 12
N50 Contigs 1,547,573 bp
Longest Contig 1,547,573 bp
Scaffold Count 12
N50 Scaffolds 1,547,573 bp
Longest Scaffold 1,547,573 bp
Genome Size 2,332,652 bp
Protein Count 2,082
Coding Density 88.91%
GC Percentage 36.66%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM52769v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02641486
Country Mexico: Monarch Butterfly Biosphere Reserve; Sierra Chivati-Huacal
Date 2014-2-3
Genbank Assembly Accession GCA_000527695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source gut of an overwintering female monarch butterfly
Latitude Longitude None
Molecule Count 2
CDS Count 2,070
Refseq Category na
Seq Rel Date 2014/02/03
Spanned Gaps 0
Species Taxid 1208583
SSU Count 1
Submitter Center for Genomic Sciences
Taxid 1208583
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ATSX00000000.1