Saccharomonospora piscinae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Pseudonocardiaceae; g__Saccharomonospora; s__Saccharomonospora piscinae
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Pseudonocardiales; f__Pseudonocardiaceae; g__Saccharomonospora; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Pseudonocardiales; f__Pseudonocardiaceae; g__Saccharomonospora; s__Saccharomonospora sp. CNQ490
NCBI Strain Identifiers CNQ490
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_005862235.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 25
N50 Contigs 613,253 bp
Longest Contig 1,117,442 bp
Scaffold Count 25
N50 Scaffolds 613,253 bp
Longest Scaffold 1,117,442 bp
Genome Size 4,941,689 bp
Protein Count 4,508
Coding Density 91.74%
GC Percentage 71.07%
Ambiguous Bases 23
GTDB representative GCA_005862235.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM52707v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597191
Country None
Date 2014-01-03
Genbank Assembly Accession GCA_000527075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 4,526
Refseq Category na
Seq Rel Date 2014/01/03
Spanned Gaps 0
Species Taxid 1137271
SSU Count 4
Submitter DOE Joint Genome Institute
Taxid 1137271
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZUM00000000.1