Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR5860
NCBI Strain Identifiers DAR5860
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 23
N50 Contigs 441,925 bp
Longest Contig 677,764 bp
Scaffold Count 16
N50 Scaffolds 1,534,463 bp
Longest Scaffold 1,534,463 bp
Genome Size 2,911,035 bp
Protein Count 2,696
Coding Density 82.98%
GC Percentage 32.85%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR5860_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02383549
Country Venezuela
Date 2014-1-31
Genbank Assembly Accession GCA_000525505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Blood
Latitude Longitude None
Molecule Count N/A
CDS Count 2,955
Refseq Category na
Seq Rel Date 2014/01/31
Spanned Gaps 7
Species Taxid 1280
SSU Count 7
Submitter Broad Institute
Taxid 1409764
Total Gap Length 11631
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JBTM00000000.1