Staphylococcus aureus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus aureus; x__Staphylococcus aureus DAR3170
NCBI Strain Identifiers DAR3170
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001027105.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 0.08%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 5
23S Count 5
tRNA Count 20
Contig Count 12
N50 Contigs 513,064 bp
Longest Contig 900,574 bp
Scaffold Count 7
N50 Scaffolds 1,531,756 bp
Longest Scaffold 1,531,756 bp
Genome Size 2,730,435 bp
Protein Count 2,484
Coding Density 83.58%
GC Percentage 32.84%
Ambiguous Bases N/A
GTDB representative GCA_001027105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Stap_aure_DAR3170_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02383534
Country Argentina
Date 2014-1-31
Genbank Assembly Accession GCA_000525205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Septic arthritis
Latitude Longitude None
Molecule Count N/A
CDS Count 2,742
Refseq Category na
Seq Rel Date 2014/01/31
Spanned Gaps 5
Species Taxid 1280
SSU Count 5
Submitter Broad Institute
Taxid 1409749
Total Gap Length 2050
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JBSX00000000.1