Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Bovismorbificans; x__Salmonella enterica subsp. enterica serovar Bovismorbificans str. Sal616
NCBI Strain Identifiers Sal616
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 50.0
5S Count 1
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 164
N50 Contigs 101,989 bp
Longest Contig 369,284 bp
Scaffold Count 164
N50 Scaffolds 101,989 bp
Longest Scaffold 369,284 bp
Genome Size 4,862,779 bp
Protein Count 4,686
Coding Density 87.81%
GC Percentage 52.16%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name sal616
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02422702
Country None
Date 2013-12-19
Genbank Assembly Accession GCA_000524905.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,961
Refseq Category na
Seq Rel Date 2013/12/19
Spanned Gaps 0
Species Taxid 28901
SSU Count 4
Submitter OARSA, CFSAN
Taxid 1430438
Total Gap Length 0
Translation Table 11
tRNA Count (total) 73
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZKZ00000000.1