Veillonella atypica
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_C; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella atypica
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Negativicutes; o__Veillonellales; f__Veillonellaceae; g__Veillonella; s__Veillonella sp. ICM51a
NCBI Strain Identifiers ICM51a
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002959915.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 53
N50 Contigs 77,485 bp
Longest Contig 207,911 bp
Scaffold Count 53
N50 Scaffolds 77,485 bp
Longest Scaffold 207,911 bp
Genome Size 2,157,029 bp
Protein Count 2,007
Coding Density 88.80%
GC Percentage 38.86%
Ambiguous Bases 6
GTDB representative GCA_002959915.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name VspICM51av1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02641570
Country None
Date 2014-1-28
Genbank Assembly Accession GCA_000524355.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,980
Refseq Category na
Seq Rel Date 2014/01/28
Spanned Gaps 0
Species Taxid 936591
SSU Count 1
Submitter JCVI
Taxid 936591
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JAPX00000000.1