Salmonella enterica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Salmonella; s__Salmonella enterica; sb__Salmonella enterica subsp. enterica; x__Salmonella enterica subsp. enterica serovar Typhi; x__Salmonella enterica subsp. enterica serovar Typhi str. STH2370
NCBI Strain Identifiers STH2370
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000006945.2)
Genome Characteristics
CheckM Completeness 99.48%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 53
N50 Contigs 204,930 bp
Longest Contig 420,648 bp
Scaffold Count 53
N50 Scaffolds 204,930 bp
Longest Scaffold 420,648 bp
Genome Size 4,757,611 bp
Protein Count 4,642
Coding Density 87.26%
GC Percentage 52.06%
Ambiguous Bases N/A
GTDB representative GCA_000006945.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name STH2370v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02569978
Country Chile: Santiago
Date 2014-1-27
Genbank Assembly Accession GCA_000523415.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,876
Refseq Category na
Seq Rel Date 2014/01/27
Spanned Gaps 0
Species Taxid 28901
SSU Count 3
Submitter Universidad de Chile
Taxid 1443995
Total Gap Length 0
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JABZ00000000.1