Streptococcus mutans
Isolate MQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus mutans; x__Streptococcus mutans B12Sm1
NCBI Strain Identifiers B12Sm1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_006739205.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 6.18%
CheckM Strain Heterogeneity 100.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 18
Contig Count 91
N50 Contigs 67,744 bp
Longest Contig 163,094 bp
Scaffold Count 91
N50 Scaffolds 67,744 bp
Longest Scaffold 163,094 bp
Genome Size 2,173,582 bp
Protein Count 2,056
Coding Density 85.40%
GC Percentage 36.92%
Ambiguous Bases N/A
GTDB representative GCA_006739205.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name out__k41_n4_samp03-contigs.fa
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02641536
Country USA
Date 2014-01-24
Genbank Assembly Accession GCA_000522605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity
Latitude Longitude None
Molecule Count N/A
CDS Count 2,143
Refseq Category na
Seq Rel Date 2014/01/24
Spanned Gaps 0
Species Taxid 1309
SSU Count 4
Submitter New York University College of Dentistry
Taxid 1225189
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master ALYQ00000000.1