Paraburkholderia caribensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Paraburkholderia; s__Paraburkholderia caribensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Paraburkholderia; s__Paraburkholderia caribensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Paraburkholderia; s__Paraburkholderia caribensis; x__Paraburkholderia caribensis MBA4
NCBI Strain Identifiers MBA4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002902945.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 1.9%
CheckM Strain Heterogeneity 0.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 3
N50 Contigs 3,352,623 bp
Longest Contig 3,575,012 bp
Scaffold Count 3
N50 Scaffolds 3,352,623 bp
Longest Scaffold 3,575,012 bp
Genome Size 9,482,704 bp
Protein Count 8,327
Coding Density 85.06%
GC Percentage 62.46%
Ambiguous Bases N/A
GTDB representative GCA_002902945.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM52254v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02641588
Country Thailand
Date 2015-10-30
Genbank Assembly Accession GCA_000522545.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count 3
CDS Count 8,355
Refseq Category na
Seq Rel Date 2015/10/30
Spanned Gaps 0
Species Taxid 75105
SSU Count 6
Submitter School of Biological Sciences, The University of Hong Kong
Taxid 1323664
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None