Pseudomonas aeruginosa
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas aeruginosa
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; x__Pseudomonas aeruginosa group; s__Pseudomonas aeruginosa; x__Pseudomonas aeruginosa BWHPSA047
NCBI Strain Identifiers BWHPSA047
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457615.1)
Genome Characteristics
CheckM Completeness 99.68%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 4
23S Count 4
tRNA Count 20
Contig Count 21
N50 Contigs 1,008,424 bp
Longest Contig 1,206,891 bp
Scaffold Count 3
N50 Scaffolds 4,883,548 bp
Longest Scaffold 4,883,548 bp
Genome Size 6,387,758 bp
Protein Count 5,863
Coding Density 89.17%
GC Percentage 66.42%
Ambiguous Bases N/A
GTDB representative GCA_001457615.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Pseu_aeru_BWHPSA047_V1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02360711
Country USA
Date 2014-1-15
Genbank Assembly Accession GCA_000520255.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum
Latitude Longitude None
Molecule Count N/A
CDS Count 5,999
Refseq Category na
Seq Rel Date 2014/01/15
Spanned Gaps 18
Species Taxid 287
SSU Count 4
Submitter Broad Institute
Taxid 1402539
Total Gap Length 28952
Translation Table 11
tRNA Count (total) 63
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZZG00000000.1