Butyricimonas virosa
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Marinifilaceae; g__Butyricimonas; s__Butyricimonas virosa
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Odoribacteraceae; g__Butyricimonas; s__Butyricimonas virosa
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Odoribacteraceae; g__Butyricimonas; s__Butyricimonas virosa; x__Butyricimonas virosa DSM 23226
NCBI Strain Identifiers DSM 23226
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (10 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 2
23S Count 2
tRNA Count 19
Contig Count 76
N50 Contigs 109,458 bp
Longest Contig 348,184 bp
Scaffold Count 68
N50 Scaffolds 118,834 bp
Longest Scaffold 455,750 bp
Genome Size 4,717,857 bp
Protein Count 3,934
Coding Density 91.00%
GC Percentage 42.30%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51910v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02584930
Country Japan
Date 2014-01-13
Genbank Assembly Accession GCA_000519105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 3,860
Refseq Category na
Seq Rel Date 2014/01/13
Spanned Gaps 8
Species Taxid 544645
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1121130
Total Gap Length 2021
Translation Table 11
tRNA Count (total) 49
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JAEW00000000.1