Tenacibaculum lutimaris
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Tenacibaculum; s__Tenacibaculum lutimaris
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Tenacibaculum; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Tenacibaculum; s__Tenacibaculum sp. 47A_GOM-205m
NCBI Strain Identifiers 47A_GOM-205m
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_003610735.1)
Genome Characteristics
CheckM Completeness 98.71%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 12
N50 Contigs 718,028 bp
Longest Contig 732,026 bp
Scaffold Count 11
N50 Scaffolds 718,028 bp
Longest Scaffold 732,026 bp
Genome Size 2,897,856 bp
Protein Count 2,766
Coding Density 91.59%
GC Percentage 31.82%
Ambiguous Bases N/A
GTDB representative GCA_003610735.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51840v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02584984
Country None
Date 2014-01-13
Genbank Assembly Accession GCA_000518405.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 2,718
Refseq Category na
Seq Rel Date 2014/01/13
Spanned Gaps 1
Species Taxid 1380384
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 1380384
Total Gap Length 510
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master JADN00000000.1