Mycoplasmoides imitans
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Mycoplasmatales; f__Mycoplasmoidaceae; g__Mycoplasmoides; s__Mycoplasmoides imitans
Filtered NCBI Taxonomy d__Bacteria; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Mycoplasma; s__Mycoplasma imitans
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Tenericutes; c__Mollicutes; o__Mycoplasmatales; f__Mycoplasmataceae; g__Mycoplasma; s__Mycoplasma imitans; x__Mycoplasma imitans ATCC 51306
NCBI Strain Identifiers ATCC 51306
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.25%
CheckM Contamination 0.75%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 29
N50 Contigs 91,272 bp
Longest Contig 111,966 bp
Scaffold Count 24
N50 Scaffolds 99,783 bp
Longest Scaffold 158,255 bp
Genome Size 922,439 bp
Protein Count 742
Coding Density 88.93%
GC Percentage 30.54%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM51830v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02584995
Country None
Date 2014-01-13
Genbank Assembly Accession GCA_000518305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source not provided; submitted under MIGS 2.1
Latitude Longitude None
Molecule Count N/A
CDS Count 723
Refseq Category representative genome
Seq Rel Date 2014/01/13
Spanned Gaps 5
Species Taxid 29560
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 1399794
Total Gap Length 2772
Translation Table 4
tRNA Count (total) 31
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JADI00000000.1