Streptococcus salivarius
Isolate HQ 5S/16S/23S 15 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp. SR4
NCBI Strain Identifiers SR4
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000785515.1)
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 15
Contig Count 77
N50 Contigs 100,373 bp
Longest Contig 304,330 bp
Scaffold Count 77
N50 Scaffolds 100,373 bp
Longest Scaffold 304,330 bp
Genome Size 2,174,541 bp
Protein Count 2,006
Coding Density 88.52%
GC Percentage 39.81%
Ambiguous Bases N/A
GTDB representative GCA_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name SspSR4v1.0
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02597444
Country None
Date 2014-1-13
Genbank Assembly Accession GCA_000517725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,016
Refseq Category na
Seq Rel Date 2014/01/13
Spanned Gaps 0
Species Taxid 1161417
SSU Count 1
Submitter JCVI
Taxid 1161417
Total Gap Length 0
Translation Table 11
tRNA Count (total) 26
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master AZYW00000000.1